Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Mir7075-201ENSMUST00000184187 82 ntBASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav11A0A0B4J1J9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav11A0A0B4J1J9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav11A0A0B4J1J9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav11A0A0B4J1J9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav11A0A0B4J1J9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav11A0A0B4J1J9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav11A0A0B4J1J9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms