Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm3375-201ENSMUST00000203929 796 ntBASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Timm23-208ENSMUST00000226683 750 ntBASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm15565-201ENSMUST00000118890 427 ntBASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm4974-201ENSMUST00000209974 875 ntBASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm5417-201ENSMUST00000079706 384 ntBASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv5-43A0A0B4J1J2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Idnk-204ENSMUST00000226010 1898 ntBASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.27■□□□□ 0.52
Igkv5-43A0A0B4J1J2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv5-43A0A0B4J1J2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms