Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv19A0A0B4J1H4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm6365-201ENSMUST00000054711 744 ntBASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trbv19A0A0B4J1H4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv19A0A0B4J1H4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv19A0A0B4J1H4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm18284-201ENSMUST00000172604 624 ntBASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv19A0A0B4J1H4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv19A0A0B4J1H4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv19A0A0B4J1H4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms