Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ighv1-42A0A0A6YY38 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-42A0A0A6YY38 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-42A0A0A6YY38 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-42A0A0A6YY38 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm12085-201ENSMUST00000119263 940 ntBASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm4974-201ENSMUST00000209974 875 ntBASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-42A0A0A6YY38 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-42A0A0A6YY38 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm27463-201ENSMUST00000183569 57 ntBASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm7889-201ENSMUST00000185591 958 ntBASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.49■□□□□ 0.23
Ighv1-42A0A0A6YY38 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm38027-201ENSMUST00000192315 235 ntBASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-42A0A0A6YY38 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-42A0A0A6YY38 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-42A0A0A6YY38 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms