Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm12821-201ENSMUST00000120022 600 ntBASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gm27454-201ENSMUST00000185090 204 ntBASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13-4-dv7A0A075B6C2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms