Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6n-6A0A075B6B2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6n-6A0A075B6B2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6n-6A0A075B6B2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm10493-201ENSMUST00000097270 612 ntBASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Haglr-201ENSMUST00000100000 2085 ntBASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-6A0A075B6B2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm42778-201ENSMUST00000199644 553 ntBASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-6A0A075B6B2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-6A0A075B6B2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms