Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-4A0A075B654 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-4A0A075B654 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-4A0A075B654 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-4A0A075B654 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-4A0A075B654 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Dancr-204ENSMUST00000132389 2347 ntBASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-4A0A075B654 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms