Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav16nA0A075B634 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Gm9847-201ENSMUST00000052528 599 ntBASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav16nA0A075B634 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16nA0A075B634 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav16nA0A075B634 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16nA0A075B634 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16nA0A075B634 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms