Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav5-1A0A075B5Z7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav5-1A0A075B5Z7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav5-1A0A075B5Z7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm37292-201ENSMUST00000192062 758 ntBASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm10252-201ENSMUST00000209541 832 ntBASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav5-1A0A075B5Z7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-1A0A075B5Z7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav5-1A0A075B5Z7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5-1A0A075B5Z7 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.33■□□□□ 0.05
Trav5-1A0A075B5Z7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Gm715-201ENSMUST00000117865 831 ntBASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav5-1A0A075B5Z7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms