Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv4A0A075B5I2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Gm11927-201ENSMUST00000118472 759 ntBASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv4A0A075B5I2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Gm10602-201ENSMUST00000098239 609 ntBASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trbv4A0A075B5I2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.9■□□□□ 0.46
Trbv4A0A075B5I2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv4A0A075B5I2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms