Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm14783-201ENSMUST00000118900 663 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm24186-201ENSMUST00000157983 127 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Mirt2-201ENSMUST00000175179 285 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm29509-201ENSMUST00000185716 321 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm29124-201ENSMUST00000186576 452 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm28196-201ENSMUST00000187719 640 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm28066-201ENSMUST00000188657 472 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm37341-201ENSMUST00000194680 371 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm18427-201ENSMUST00000195422 515 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm18413-201ENSMUST00000221573 655 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim3Q9R1R2 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Trim3Q9R1R2 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.4□□□□□ -1.55
Trim3Q9R1R2 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.4□□□□□ -1.55
Trim3Q9R1R2 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Trim3Q9R1R2 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim3Q9R1R2 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.4□□□□□ -1.55
Trim3Q9R1R2 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.4□□□□□ -1.55
Trim3Q9R1R2 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.4□□□□□ -1.55
Trim3Q9R1R2 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm15840-201ENSMUST00000122099 943 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm25782-201ENSMUST00000122526 289 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm25342-201ENSMUST00000157459 122 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm23631-201ENSMUST00000175291 123 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm6472-201ENSMUST00000178147 651 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm44494-201ENSMUST00000196760 129 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm22897-202ENSMUST00000197782 127 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm44053-201ENSMUST00000203364 929 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm2926-201ENSMUST00000205625 239 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Gm45734-201ENSMUST00000211916 411 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.39□□□□□ -1.55
Trim3Q9R1R2 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim3Q9R1R2 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms