Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm45485-201ENSMUST00000211229 357 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm33178-201ENSMUST00000212090 257 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm3785-201ENSMUST00000221000 202 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm7045-201ENSMUST00000221466 605 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm22043-201ENSMUST00000082993 158 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Pramel-201ENSMUST00000118979 1383 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm2987-201ENSMUST00000187673 1693 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ddx56Q9D0R4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm14382-201ENSMUST00000117374 437 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm15765-201ENSMUST00000118407 910 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm13642-201ENSMUST00000121697 381 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm11233-201ENSMUST00000122357 634 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm16269-201ENSMUST00000160532 409 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm25525-201ENSMUST00000177701 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm26178-201ENSMUST00000177706 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm5283-201ENSMUST00000177874 334 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm22852-201ENSMUST00000177899 101 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm26465-201ENSMUST00000178517 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm24317-201ENSMUST00000178536 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm5947-201ENSMUST00000179156 714 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm25021-201ENSMUST00000179184 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm5645-201ENSMUST00000179597 714 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm22995-201ENSMUST00000179670 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm24424-201ENSMUST00000179714 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm24389-201ENSMUST00000179962 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm25672-201ENSMUST00000180111 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm29163-201ENSMUST00000188029 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm37265-201ENSMUST00000191698 885 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm38237-201ENSMUST00000193366 376 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm37187-201ENSMUST00000193425 341 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm4332-201ENSMUST00000196114 346 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm31520-201ENSMUST00000203048 733 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm17987-201ENSMUST00000206902 603 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm8264-201ENSMUST00000217801 465 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm8290-201ENSMUST00000218202 477 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm18940-201ENSMUST00000222518 871 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm23815-201ENSMUST00000083231 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm23520-201ENSMUST00000093736 107 ntBASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Ddx56Q9D0R4 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms