Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm23855-201ENSMUST00000158377 135 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm18358-201ENSMUST00000173179 1277 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm23632-201ENSMUST00000175289 125 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm22642-201ENSMUST00000175352 252 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Mir7033-201ENSMUST00000184259 81 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm18728-201ENSMUST00000186155 753 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm9127-201ENSMUST00000188041 985 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm20954-201ENSMUST00000189078 644 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm44403-201ENSMUST00000198554 129 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm44604-201ENSMUST00000205475 496 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm18537-201ENSMUST00000205709 989 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.16□□□□□ -1.42
Trim8Q99PJ2 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim8Q99PJ2 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm14733-201ENSMUST00000117680 133 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm14103-201ENSMUST00000119075 366 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm24551-201ENSMUST00000158645 92 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm8604-201ENSMUST00000183150 965 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm28356-202ENSMUST00000187566 858 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm18849-201ENSMUST00000189861 560 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm21524-201ENSMUST00000190499 696 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm38291-201ENSMUST00000193671 259 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm44181-201ENSMUST00000203106 483 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm43967-201ENSMUST00000203787 301 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm44688-201ENSMUST00000209083 537 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC144733.1-201ENSMUST00000222893 1289 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.15□□□□□ -1.42
Trim8Q99PJ2 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms