Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm2987-201ENSMUST00000187673 1693 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm4853-201ENSMUST00000119359 394 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm16557-201ENSMUST00000159182 191 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm18396-201ENSMUST00000177095 361 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Mup-ps7-201ENSMUST00000178292 545 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Mup-ps9-201ENSMUST00000178847 545 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm27006-201ENSMUST00000182218 943 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm28560-201ENSMUST00000186091 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm28334-201ENSMUST00000186653 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm28495-201ENSMUST00000188452 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm28232-201ENSMUST00000188683 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm28481-201ENSMUST00000189231 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm29059-201ENSMUST00000191534 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm37765-201ENSMUST00000192395 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm37237-201ENSMUST00000192893 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm36968-201ENSMUST00000193737 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm38290-201ENSMUST00000195238 315 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm6171-201ENSMUST00000220760 645 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm21286-201ENSMUST00000098035 545 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 AC124446.1-201ENSMUST00000221027 2644 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.22□□□□□ -1.25
Clp1Q99LI9 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Gm45577-201ENSMUST00000210206 2287 ntBASIC7.21□□□□□ -1.25
Clp1Q99LI9 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Clp1Q99LI9 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm11984-201ENSMUST00000118142 766 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm15443-201ENSMUST00000118947 820 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm7421-201ENSMUST00000119298 639 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm13339-201ENSMUST00000120651 510 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm7365-201ENSMUST00000120877 639 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm14125-202ENSMUST00000120921 756 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm26349-201ENSMUST00000157530 130 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm26410-201ENSMUST00000157670 261 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm22116-201ENSMUST00000158791 141 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm17149-201ENSMUST00000164712 375 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm18354-201ENSMUST00000173515 1068 ntBASIC7.21□□□□□ -1.26
Clp1Q99LI9 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms