Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm10936-201ENSMUST00000105264 252 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm13770-201ENSMUST00000117149 305 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm17086-201ENSMUST00000171346 484 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm26731-201ENSMUST00000180683 543 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm23459-201ENSMUST00000083259 131 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cstf1Q99LC2 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm22272-201ENSMUST00000104039 134 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm15490-201ENSMUST00000119894 387 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm15120-201ENSMUST00000120602 301 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm13121-201ENSMUST00000120637 632 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm14349-201ENSMUST00000137155 902 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm16060-201ENSMUST00000153140 478 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Mir7056-201ENSMUST00000183776 59 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Mir6926-201ENSMUST00000184562 68 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm6543-201ENSMUST00000197353 808 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm44225-201ENSMUST00000203582 186 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm2961-201ENSMUST00000211074 772 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Mir31-201ENSMUST00000083474 106 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Mir30b-201ENSMUST00000083542 96 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Cstf1Q99LC2 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.8□□□□□ -1.48
Cstf1Q99LC2 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms