Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm11821-201ENSMUST00000117335 979 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm15660-201ENSMUST00000118997 478 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm9208-201ENSMUST00000120468 948 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm14713-201ENSMUST00000122362 686 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm23279-201ENSMUST00000157912 97 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm28925-201ENSMUST00000188586 168 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm44954-201ENSMUST00000208513 227 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm22126-201ENSMUST00000083244 142 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 n-R5s69-201ENSMUST00000083872 119 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Gm37114-201ENSMUST00000195065 1804 ntBASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Brf1Q8CFK2 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm22499-201ENSMUST00000104501 135 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm13866-201ENSMUST00000118901 968 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm11350-201ENSMUST00000121436 870 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm12322-201ENSMUST00000121605 389 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm12001-201ENSMUST00000121727 913 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm16285-201ENSMUST00000162999 347 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm37716-201ENSMUST00000193553 947 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm19739-201ENSMUST00000195941 153 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm29745-201ENSMUST00000198005 687 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm43929-201ENSMUST00000203025 409 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm38574-201ENSMUST00000211855 640 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7□□□□□ -1.29
Brf1Q8CFK2 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC7□□□□□ -1.29
Brf1Q8CFK2 AC162934.3-201ENSMUST00000223015 841 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 AL669819.1-201ENSMUST00000225143 330 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Brf1Q8CFK2 AC098742.1-201ENSMUST00000227945 373 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm45001-201ENSMUST00000208279 2515 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Gm15394-201ENSMUST00000119656 1308 ntBASIC7□□□□□ -1.29
Brf1Q8CFK2 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Brf1Q8CFK2 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Brf1Q8CFK2 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms