Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.57□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm15332-201ENSMUST00000118386 357 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm11313-201ENSMUST00000118779 432 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm12618-201ENSMUST00000121754 483 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm26353-201ENSMUST00000158224 255 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Mir6992-201ENSMUST00000183342 109 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm27820-201ENSMUST00000183628 175 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm27266-201ENSMUST00000184521 123 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm18177-201ENSMUST00000188373 404 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm18444-201ENSMUST00000191239 629 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43037-201ENSMUST00000196808 250 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm18330-201ENSMUST00000199246 547 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm10688-201ENSMUST00000214985 520 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm19007-201ENSMUST00000217746 874 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.56□□□□□ -1.52
Ccdc28bQ8CEG5 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm11971-201ENSMUST00000117715 288 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm15765-201ENSMUST00000118407 910 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm7312-201ENSMUST00000118798 469 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm15034-201ENSMUST00000120043 349 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14970-201ENSMUST00000122289 355 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm25826-201ENSMUST00000157090 137 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm8419-201ENSMUST00000189886 412 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43315-201ENSMUST00000198120 313 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm42886-201ENSMUST00000199214 466 ntBASIC5.55□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43033-201ENSMUST00000199682 425 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms