Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm28554-202ENSMUST00000189175 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29213-202ENSMUST00000189703 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28851-202ENSMUST00000189757 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28461-201ENSMUST00000190023 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm31211-201ENSMUST00000199170 253 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm18100-201ENSMUST00000200897 452 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm19786-201ENSMUST00000222589 580 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm22657-201ENSMUST00000104197 132 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm12422-201ENSMUST00000121431 302 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm27875-201ENSMUST00000184425 123 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm43919-201ENSMUST00000204303 364 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm7688-201ENSMUST00000212857 337 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm11550-201ENSMUST00000118210 699 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm14769-201ENSMUST00000118590 432 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm12444-201ENSMUST00000121512 877 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm3170-201ENSMUST00000168753 850 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm24103-201ENSMUST00000174930 77 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm3348-201ENSMUST00000177813 850 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm43524-201ENSMUST00000197278 298 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Gm17984-201ENSMUST00000205286 859 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a6Q8C6K9 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm2429-201ENSMUST00000194635 586 ntBASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.05□□□□□ -1.6
Col6a6Q8C6K9 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms