Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm38062-201ENSMUST00000192541 1856 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm45872-201ENSMUST00000209804 1584 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Mir760-201ENSMUST00000103257 119 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm14116-201ENSMUST00000117733 805 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm13006-201ENSMUST00000118683 214 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm14070-201ENSMUST00000120773 428 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm14353-201ENSMUST00000122200 869 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm23888-201ENSMUST00000122690 253 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm23740-201ENSMUST00000157385 100 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm9672-201ENSMUST00000166437 425 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm26570-201ENSMUST00000180672 342 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28219-201ENSMUST00000185452 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28303-201ENSMUST00000185642 747 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29244-201ENSMUST00000185825 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29437-201ENSMUST00000185865 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28910-201ENSMUST00000185921 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28812-201ENSMUST00000185963 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29468-201ENSMUST00000185978 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28854-201ENSMUST00000186218 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28636-201ENSMUST00000186353 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28452-201ENSMUST00000186623 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29298-201ENSMUST00000186704 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28227-201ENSMUST00000186862 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28796-201ENSMUST00000186905 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28473-201ENSMUST00000187325 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28773-201ENSMUST00000187925 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29422-201ENSMUST00000188062 694 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28787-201ENSMUST00000188357 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29451-201ENSMUST00000188862 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29033-201ENSMUST00000189114 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29614-201ENSMUST00000189263 694 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28751-201ENSMUST00000189287 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29559-201ENSMUST00000189412 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28272-201ENSMUST00000189512 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28123-201ENSMUST00000189725 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28368-201ENSMUST00000189804 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29119-201ENSMUST00000189973 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28716-201ENSMUST00000190217 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29239-201ENSMUST00000190304 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28531-201ENSMUST00000190529 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm28165-201ENSMUST00000190669 694 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm37990-201ENSMUST00000195821 696 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm43510-201ENSMUST00000197922 353 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm43235-201ENSMUST00000200121 297 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm44055-201ENSMUST00000204376 247 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC161520.1-201ENSMUST00000210954 939 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm29818-201ENSMUST00000218070 165 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm17890-201ENSMUST00000221419 757 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC153662.1-201ENSMUST00000222220 270 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC173481.1-201ENSMUST00000223351 270 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms