Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm23806-201ENSMUST00000175157 109 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm43629-201ENSMUST00000201782 704 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm38574-201ENSMUST00000211855 640 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm19174-201ENSMUST00000216944 956 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm11699-201ENSMUST00000119016 401 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm25445-201ENSMUST00000158996 299 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm44091-201ENSMUST00000205212 649 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm4510-201ENSMUST00000218265 427 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm22807-201ENSMUST00000082737 129 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Trub1Q8C0D0 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trub1Q8C0D0 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm15754-201ENSMUST00000119191 478 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm15959-201ENSMUST00000121724 368 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm26372-201ENSMUST00000157831 236 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm8582-201ENSMUST00000164061 789 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm2429-201ENSMUST00000194635 586 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm43078-201ENSMUST00000197222 168 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trub1Q8C0D0 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms