Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Trim35Q8C006 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Zfp667-205ENSMUST00000170776 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm37354-201ENSMUST00000193333 2384 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm42481-201ENSMUST00000196822 2178 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 AC153526.3-201ENSMUST00000220145 2183 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm38277-201ENSMUST00000195172 1367 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Plp1-202ENSMUST00000113085 2540 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Trim35Q8C006 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.71□□□□□ -1.01
Trim35Q8C006 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.01
Trim35Q8C006 Zfp454-206ENSMUST00000163301 2090 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
Trim35Q8C006 Gm44925-201ENSMUST00000208879 2110 ntBASIC8.71□□□□□ -1.01
Trim35Q8C006 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim35Q8C006 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim35Q8C006 Ccdc162-211ENSMUST00000190522 1810 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Trim35Q8C006 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.01
Trim35Q8C006 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Trim35Q8C006 Gm28229-201ENSMUST00000188747 2153 ntBASIC8.71□□□□□ -1.01
Trim35Q8C006 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Ptgds-202ENSMUST00000114251 830 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm13930-201ENSMUST00000118569 368 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm14627-201ENSMUST00000118931 567 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Mup-ps19-201ENSMUST00000120390 519 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm11229-201ENSMUST00000121993 437 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm24062-201ENSMUST00000157490 266 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm23044-201ENSMUST00000157891 100 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm26291-201ENSMUST00000158889 137 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm11107-201ENSMUST00000165414 505 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm28281-201ENSMUST00000185658 187 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm30932-201ENSMUST00000191893 274 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm17954-201ENSMUST00000195893 607 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm18362-201ENSMUST00000221786 529 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm22362-201ENSMUST00000083102 134 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gramd1c-202ENSMUST00000114677 3271 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Gm37195-201ENSMUST00000192006 3018 ntBASIC8.71□□□□□ -1.02
Trim35Q8C006 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Mirg-212ENSMUST00000183144 3797 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
Trim35Q8C006 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim35Q8C006 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Trim35Q8C006 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm43201-201ENSMUST00000195925 3416 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.7□□□□□ -1.02
Trim35Q8C006 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim35Q8C006 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim35Q8C006 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms