Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Chmp2bQ8BJF9 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm7146-201ENSMUST00000116079 739 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm7931-201ENSMUST00000121537 271 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm22160-201ENSMUST00000158405 328 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm22428-201ENSMUST00000158554 132 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm23050-201ENSMUST00000158775 165 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Scarna10-201ENSMUST00000158992 325 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm23162-201ENSMUST00000175081 121 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm26057-201ENSMUST00000178099 165 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm21542-201ENSMUST00000182307 993 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm18698-201ENSMUST00000192327 668 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm17952-201ENSMUST00000193914 747 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm19033-201ENSMUST00000208516 964 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Chmp2bQ8BJF9 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Gm11270-201ENSMUST00000117685 471 ntBASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Gm12307-201ENSMUST00000120581 590 ntBASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Gm15596-201ENSMUST00000121139 784 ntBASIC5.78□□□□□ -1.48
Chmp2bQ8BJF9 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms