Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm9429-201ENSMUST00000117804 868 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm23806-201ENSMUST00000175157 109 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Mir409-201ENSMUST00000198153 79 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm9038-201ENSMUST00000203400 604 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm18940-201ENSMUST00000222518 871 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm11270-201ENSMUST00000117685 471 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm23537-201ENSMUST00000157536 330 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm17086-201ENSMUST00000171346 484 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm22355-201ENSMUST00000175531 96 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm10784-201ENSMUST00000178715 238 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm26731-201ENSMUST00000180683 543 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Mir7687-201ENSMUST00000184722 59 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm44330-201ENSMUST00000200106 143 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm11617-201ENSMUST00000119609 639 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm12854-201ENSMUST00000128518 297 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm27543-201ENSMUST00000183562 177 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm2011-203ENSMUST00000203750 435 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Gm7665-201ENSMUST00000076710 297 ntBASIC6.53□□□□□ -1.36
Nup98Q6PFD9 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm25603-201ENSMUST00000158361 105 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm29592-201ENSMUST00000189434 370 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm2053-201ENSMUST00000195671 631 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Nup98Q6PFD9 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nup98Q6PFD9 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Gm15971-201ENSMUST00000119372 211 ntBASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.51□□□□□ -1.37
Nup98Q6PFD9 Gm44673-201ENSMUST00000205692 996 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms