Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm38137-201ENSMUST00000193735 1401 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm14886-201ENSMUST00000117208 2629 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm26078-201ENSMUST00000104067 128 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm23294-201ENSMUST00000104150 164 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm23839-201ENSMUST00000116957 109 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm15233-201ENSMUST00000118747 400 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm15044-201ENSMUST00000120703 598 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm23233-201ENSMUST00000157301 137 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm23030-201ENSMUST00000158004 273 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm26170-201ENSMUST00000158419 148 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm38040-201ENSMUST00000193505 225 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm37375-201ENSMUST00000193859 387 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm37385-201ENSMUST00000195223 387 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm18702-201ENSMUST00000196923 588 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm42619-201ENSMUST00000197564 1136 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm43798-201ENSMUST00000202056 394 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm43456-201ENSMUST00000202519 457 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm43973-201ENSMUST00000203562 210 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm8291-201ENSMUST00000209635 1261 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 CT485612.1-201ENSMUST00000222555 382 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm5087-204ENSMUST00000225820 645 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm37127-201ENSMUST00000192924 3036 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Gm14857-201ENSMUST00000117862 3185 ntBASIC6□□□□□ -1.45
Upf3bQ3ULL6 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Upf3bQ3ULL6 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm11774-201ENSMUST00000118601 293 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm25291-201ENSMUST00000122795 144 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm3076-201ENSMUST00000161613 451 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upf3bQ3ULL6 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms