Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm12482-201ENSMUST00000120435 630 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm14989-201ENSMUST00000120497 207 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm25120-201ENSMUST00000180148 79 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox9Q04887 Mir6398-201ENSMUST00000184541 102 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm37784-201ENSMUST00000193233 189 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm37235-201ENSMUST00000195171 59 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm8861-201ENSMUST00000196346 832 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm43456-201ENSMUST00000202519 457 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm45473-201ENSMUST00000211452 616 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm45739-201ENSMUST00000213094 388 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm5087-204ENSMUST00000225820 645 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Sox9Q04887 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Sox9Q04887 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox9Q04887 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.58□□□□□ -1.36
Sox9Q04887 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Sox9Q04887 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox9Q04887 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox9Q04887 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox9Q04887 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox9Q04887 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox9Q04887 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Sox9Q04887 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm12392-201ENSMUST00000118014 938 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm15766-201ENSMUST00000118025 813 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm15331-201ENSMUST00000120225 385 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm9001-201ENSMUST00000121642 399 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm21959-201ENSMUST00000178439 452 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.57□□□□□ -1.36
Sox9Q04887 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm17997-201ENSMUST00000211801 840 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6.57□□□□□ -1.36
Sox9Q04887 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.57□□□□□ -1.36
Sox9Q04887 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.57□□□□□ -1.36
Sox9Q04887 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms