Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm38036-201ENSMUST00000194586 3564 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm24265-201ENSMUST00000101833 141 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm11990-201ENSMUST00000121505 897 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm22895-201ENSMUST00000157508 308 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm23774-201ENSMUST00000158990 131 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Mir5112-201ENSMUST00000174897 60 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm22122-201ENSMUST00000175147 200 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm24407-201ENSMUST00000177864 141 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm22420-201ENSMUST00000178795 126 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm28017-201ENSMUST00000183434 126 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm18969-201ENSMUST00000189423 730 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm43743-202ENSMUST00000198353 491 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm7832-201ENSMUST00000202613 880 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm44132-201ENSMUST00000205142 151 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm10064-201ENSMUST00000071235 399 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm24029-201ENSMUST00000083928 143 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Nkx3-1P97436 Gm45520-201ENSMUST00000210109 2031 ntBASIC4.96□□□□□ -1.62
Nkx3-1P97436 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Mir711-201ENSMUST00000102188 82 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm23750-201ENSMUST00000104222 132 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm4234-201ENSMUST00000119747 714 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm14998-201ENSMUST00000120502 495 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm25227-201ENSMUST00000158204 112 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm7335-201ENSMUST00000172475 373 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Mir6539-201ENSMUST00000183732 110 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm27855-201ENSMUST00000184122 128 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm29454-201ENSMUST00000190805 393 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm35648-201ENSMUST00000202304 475 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm6009-201ENSMUST00000210848 280 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm20786-201ENSMUST00000212649 436 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 AC154755.1-201ENSMUST00000225244 537 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Gm23795-201ENSMUST00000084006 137 ntBASIC4.95□□□□□ -1.62
Nkx3-1P97436 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nkx3-1P97436 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms