Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm43842-201ENSMUST00000202890 2982 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm38082-201ENSMUST00000192800 6882 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm4911-201ENSMUST00000119388 945 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm10784-201ENSMUST00000178715 238 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm4962-201ENSMUST00000199640 2977 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm23928-201ENSMUST00000082469 145 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm25592-201ENSMUST00000082635 131 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm24405-201ENSMUST00000083033 167 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
PrkdcP97313 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PrkdcP97313 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.72□□□□□ -1.81
PrkdcP97313 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.72□□□□□ -1.81
PrkdcP97313 Gm23883-201ENSMUST00000122686 290 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm22725-201ENSMUST00000158092 110 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PrkdcP97313 Gm27148-201ENSMUST00000185086 160 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm28097-201ENSMUST00000187333 366 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm37336-202ENSMUST00000193705 468 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PrkdcP97313 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PrkdcP97313 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PrkdcP97313 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Gm22758-201ENSMUST00000102275 96 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC3.72□□□□□ -1.81
PrkdcP97313 Ear-ps9-201ENSMUST00000161963 460 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Gm45413-201ENSMUST00000210389 3538 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PrkdcP97313 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 AC121942.1-201ENSMUST00000224459 2891 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 AC107232.1-201ENSMUST00000227785 1503 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.72□□□□□ -1.81
PrkdcP97313 Gm23993-201ENSMUST00000157478 144 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm37838-201ENSMUST00000194464 312 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.72□□□□□ -1.81
PrkdcP97313 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PrkdcP97313 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PrkdcP97313 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PrkdcP97313 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PrkdcP97313 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms