Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdx2P43241 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.47□□□□□ -1.53
Cdx2P43241 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdx2P43241 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.47□□□□□ -1.53
Cdx2P43241 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.47□□□□□ -1.53
Cdx2P43241 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdx2P43241 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.47□□□□□ -1.53
Cdx2P43241 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx2P43241 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx2P43241 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx2P43241 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Cdx2P43241 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Cdx2P43241 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.46□□□□□ -1.53
Cdx2P43241 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cdx2P43241 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm11826-201ENSMUST00000118781 438 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Gm12267-201ENSMUST00000121609 761 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cdx2P43241 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm26318-201ENSMUST00000176507 96 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.46□□□□□ -1.54
Cdx2P43241 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm18117-201ENSMUST00000187720 742 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Gm5436-201ENSMUST00000058103 643 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm22807-201ENSMUST00000082737 129 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Mir449a-201ENSMUST00000083641 91 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Cdx2P43241 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Cdx2P43241 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.46□□□□□ -1.54
Cdx2P43241 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cdx2P43241 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.46□□□□□ -1.54
Cdx2P43241 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Cdx2P43241 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Cdx2P43241 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Cdx2P43241 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Cdx2P43241 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm15741-201ENSMUST00000119401 754 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm14472-201ENSMUST00000119815 282 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm11677-201ENSMUST00000121349 977 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.45□□□□□ -1.54
Cdx2P43241 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm17907-201ENSMUST00000173150 710 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm22355-201ENSMUST00000175531 96 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm31306-201ENSMUST00000197517 508 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm6520-201ENSMUST00000200636 410 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm36378-201ENSMUST00000201709 388 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm43631-201ENSMUST00000202011 369 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Gm7990-201ENSMUST00000212126 593 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Cdx2P43241 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.45□□□□□ -1.54
Cdx2P43241 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cdx2P43241 Gm25187-201ENSMUST00000083906 133 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms