Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Traf1P39428 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 Gm5401-201ENSMUST00000122444 365 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.75□□□□□ -1.33
Traf1P39428 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.75□□□□□ -1.33
Traf1P39428 Gm23958-201ENSMUST00000157207 105 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm6047-201ENSMUST00000167221 574 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.75□□□□□ -1.33
Traf1P39428 Gm27679-201ENSMUST00000184612 84 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm27409-201ENSMUST00000184727 80 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.75□□□□□ -1.33
Traf1P39428 Gm42824-201ENSMUST00000199361 247 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm36378-201ENSMUST00000201709 388 ntBASIC6.75□□□□□ -1.33
Traf1P39428 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.75□□□□□ -1.33
Traf1P39428 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Traf1P39428 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Traf1P39428 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Traf1P39428 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Traf1P39428 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.75□□□□□ -1.33
Traf1P39428 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Traf1P39428 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Traf1P39428 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Traf1P39428 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Traf1P39428 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Traf1P39428 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Gm15073-201ENSMUST00000117432 634 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm11617-201ENSMUST00000119609 639 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm25227-201ENSMUST00000158204 112 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Traf1P39428 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.74□□□□□ -1.33
Traf1P39428 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.74□□□□□ -1.33
Traf1P39428 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm9480-201ENSMUST00000198038 616 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Gm9057-201ENSMUST00000198791 296 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm7832-201ENSMUST00000202613 880 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.74□□□□□ -1.33
Traf1P39428 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Gm46192-201ENSMUST00000217894 326 ntBASIC6.74□□□□□ -1.33
Traf1P39428 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.74□□□□□ -1.33
Traf1P39428 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Traf1P39428 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Traf1P39428 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Traf1P39428 Gm10705-201ENSMUST00000098980 461 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.74□□□□□ -1.33
Traf1P39428 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Traf1P39428 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.74□□□□□ -1.33
Traf1P39428 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.74□□□□□ -1.33
Traf1P39428 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.74□□□□□ -1.33
Traf1P39428 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Traf1P39428 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Traf1P39428 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Traf1P39428 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Traf1P39428 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms