Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm12096-201ENSMUST00000121149 829 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm7973-201ENSMUST00000122107 488 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC7.76□□□□□ -1.17
Col18a1P39061 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm37989-201ENSMUST00000195202 803 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Gm45228-201ENSMUST00000206585 352 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.76□□□□□ -1.17
Col18a1P39061 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC7.76□□□□□ -1.17
Col18a1P39061 n-R5s85-201ENSMUST00000083453 113 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.76□□□□□ -1.17
Col18a1P39061 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col18a1P39061 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col18a1P39061 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Gm24265-201ENSMUST00000101833 141 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Gm22195-201ENSMUST00000116861 108 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm24532-201ENSMUST00000157951 286 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm7316-201ENSMUST00000165395 445 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm22122-201ENSMUST00000175147 200 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm24407-201ENSMUST00000177864 141 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Gm28724-201ENSMUST00000186149 625 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm18598-201ENSMUST00000207724 597 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm45551-201ENSMUST00000211459 928 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm17999-201ENSMUST00000211568 542 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm7990-201ENSMUST00000212126 593 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 AC153840.1-201ENSMUST00000219685 313 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm18591-201ENSMUST00000220568 763 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.75□□□□□ -1.17
Col18a1P39061 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col18a1P39061 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Col18a1P39061 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Gm42513-201ENSMUST00000197831 2119 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.75□□□□□ -1.17
Col18a1P39061 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col18a1P39061 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC7.75□□□□□ -1.17
Col18a1P39061 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col18a1P39061 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC7.75□□□□□ -1.17
Col18a1P39061 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col18a1P39061 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col18a1P39061 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col18a1P39061 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm24578-201ENSMUST00000103970 129 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm17223-201ENSMUST00000171413 481 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 CT009733.1-203ENSMUST00000224033 451 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 AC167192.4-201ENSMUST00000224087 993 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm23624-201ENSMUST00000082463 321 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm22287-201ENSMUST00000083197 107 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Col18a1P39061 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.74□□□□□ -1.17
Col18a1P39061 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm45562-201ENSMUST00000210015 1537 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms