Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BdnfP21237 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BdnfP21237 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BdnfP21237 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BdnfP21237 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BdnfP21237 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.88□□□□□ -1.47
BdnfP21237 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.88□□□□□ -1.47
BdnfP21237 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BdnfP21237 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
BdnfP21237 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BdnfP21237 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm13193-201ENSMUST00000117275 225 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm15216-201ENSMUST00000118058 277 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Anp32-ps-201ENSMUST00000118265 388 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm12387-201ENSMUST00000118573 955 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm7212-201ENSMUST00000120817 348 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm12101-201ENSMUST00000121590 390 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm23894-201ENSMUST00000158107 313 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm20454-201ENSMUST00000172713 221 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Gm9285-201ENSMUST00000177691 697 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Gm1972-201ENSMUST00000181606 964 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm29385-201ENSMUST00000186831 363 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm7019-201ENSMUST00000194122 369 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.87□□□□□ -1.47
BdnfP21237 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm43561-201ENSMUST00000199866 448 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm32158-201ENSMUST00000200135 404 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm19764-201ENSMUST00000203630 649 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.87□□□□□ -1.47
BdnfP21237 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm4556-201ENSMUST00000217808 355 ntBASIC5.87□□□□□ -1.47
BdnfP21237 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Gm24695-201ENSMUST00000083877 83 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BdnfP21237 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.87□□□□□ -1.47
BdnfP21237 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
BdnfP21237 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BdnfP21237 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
BdnfP21237 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.86□□□□□ -1.47
BdnfP21237 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.86□□□□□ -1.47
BdnfP21237 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BdnfP21237 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.86□□□□□ -1.47
BdnfP21237 Gm14163-201ENSMUST00000117342 217 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Gm14173-201ENSMUST00000117690 278 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Gm5793-201ENSMUST00000119393 630 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.86□□□□□ -1.47
BdnfP21237 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.86□□□□□ -1.47
BdnfP21237 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Gm23674-201ENSMUST00000157473 131 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Gm25387-201ENSMUST00000157813 132 ntBASIC5.86□□□□□ -1.47
BdnfP21237 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
BdnfP21237 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
BdnfP21237 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BdnfP21237 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BdnfP21237 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms