Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir7115-201ENSMUST00000184275 64 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm27148-201ENSMUST00000185086 160 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm5575-201ENSMUST00000190879 398 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm6197-201ENSMUST00000192273 454 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm4332-201ENSMUST00000196114 346 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm29784-201ENSMUST00000196217 406 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm8874-201ENSMUST00000196826 286 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm19596-201ENSMUST00000203685 739 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC4.54□□□□□ -1.68
Sdc1P18828 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm19011-201ENSMUST00000221777 808 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm10095-201ENSMUST00000222765 483 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 CT030260.1-201ENSMUST00000223243 442 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sdc1P18828 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm23623-201ENSMUST00000082461 107 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Sdc1P18828 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Sdc1P18828 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Sdc1P18828 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sdc1P18828 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm23834-201ENSMUST00000104436 129 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm9427-201ENSMUST00000116187 651 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm11971-201ENSMUST00000117715 288 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm11313-201ENSMUST00000118779 432 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm14728-201ENSMUST00000122196 492 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm3757-201ENSMUST00000125878 675 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm23233-201ENSMUST00000157301 137 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm23855-201ENSMUST00000158377 135 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm24680-201ENSMUST00000158759 126 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC4.53□□□□□ -1.68
Sdc1P18828 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm27820-201ENSMUST00000183628 175 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm20239-201ENSMUST00000196610 982 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm43546-201ENSMUST00000196721 943 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm31306-201ENSMUST00000197517 508 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm6366-201ENSMUST00000198766 826 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm43040-201ENSMUST00000202399 558 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm42713-201ENSMUST00000202709 945 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm45136-201ENSMUST00000205793 943 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm5586-201ENSMUST00000206264 795 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm45422-201ENSMUST00000211476 246 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm19169-201ENSMUST00000220109 1246 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sdc1P18828 n-R5s95-201ENSMUST00000082684 118 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Gm25818-201ENSMUST00000083282 164 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Mir455-201ENSMUST00000093594 82 ntBASIC4.53□□□□□ -1.68
Sdc1P18828 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Sdc1P18828 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sdc1P18828 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Sdc1P18828 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sdc1P18828 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms