Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Mir6367-201ENSMUST00000183385 102 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm21654-201ENSMUST00000188086 691 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm38185-201ENSMUST00000193195 694 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Ighv5-19-201ENSMUST00000193466 297 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm43116-201ENSMUST00000199789 195 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm18838-201ENSMUST00000204855 886 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm18851-201ENSMUST00000210087 1058 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 AC131029.2-201ENSMUST00000226696 628 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx1P18111 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC4.75□□□□□ -1.65
Cdx1P18111 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx1P18111 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC4.75□□□□□ -1.65
Cdx1P18111 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx1P18111 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx1P18111 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm14655-201ENSMUST00000120124 578 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC4.74□□□□□ -1.65
Cdx1P18111 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm26346-201ENSMUST00000157525 329 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm23896-201ENSMUST00000158109 130 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm22518-201ENSMUST00000158267 68 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm16125-201ENSMUST00000159003 339 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm27210-201ENSMUST00000184263 402 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Scgb2b33-201ENSMUST00000187413 334 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm37996-201ENSMUST00000191859 367 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm37475-201ENSMUST00000193107 1015 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm37477-201ENSMUST00000195215 884 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm43233-201ENSMUST00000200491 616 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm44134-202ENSMUST00000204777 545 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm44091-201ENSMUST00000205212 649 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm18863-201ENSMUST00000217004 1299 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdx1P18111 AC122290.1-201ENSMUST00000225631 1078 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx1P18111 Gm24695-201ENSMUST00000083877 83 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 AC154612.1-202ENSMUST00000224806 1725 ntBASIC4.74□□□□□ -1.65
Cdx1P18111 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Cdx1P18111 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Cdx1P18111 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Cdx1P18111 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx1P18111 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx1P18111 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx1P18111 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdx1P18111 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx1P18111 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx1P18111 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx1P18111 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx1P18111 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms