Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col1a1P11087 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm24706-201ENSMUST00000082806 137 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.6□□□□□ -1.35
Col1a1P11087 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col1a1P11087 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col1a1P11087 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col1a1P11087 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm15186-201ENSMUST00000119345 563 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm15812-201ENSMUST00000162331 748 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm8256-201ENSMUST00000169178 453 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm3242-201ENSMUST00000171273 485 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm25534-201ENSMUST00000175365 125 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col1a1P11087 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm4822-201ENSMUST00000077551 479 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Mir17-201ENSMUST00000083574 84 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.6□□□□□ -1.35
Col1a1P11087 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col1a1P11087 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.59□□□□□ -1.35
Col1a1P11087 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Col1a1P11087 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col1a1P11087 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.59□□□□□ -1.35
Col1a1P11087 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.59□□□□□ -1.35
Col1a1P11087 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.59□□□□□ -1.35
Col1a1P11087 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.59□□□□□ -1.35
Col1a1P11087 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Col1a1P11087 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col1a1P11087 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.59□□□□□ -1.35
Col1a1P11087 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.59□□□□□ -1.36
Col1a1P11087 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.59□□□□□ -1.36
Col1a1P11087 Gm9457-201ENSMUST00000180176 372 ntBASIC6.59□□□□□ -1.36
Col1a1P11087 Gm34176-201ENSMUST00000192621 474 ntBASIC6.59□□□□□ -1.36
Col1a1P11087 Gm44673-201ENSMUST00000205692 996 ntBASIC6.59□□□□□ -1.36
Col1a1P11087 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col1a1P11087 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Col1a1P11087 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Col1a1P11087 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Col1a1P11087 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col1a1P11087 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col1a1P11087 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col1a1P11087 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col1a1P11087 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col1a1P11087 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col1a1P11087 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col1a1P11087 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
Col1a1P11087 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Col1a1P11087 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col1a1P11087 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col1a1P11087 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.58□□□□□ -1.36
Col1a1P11087 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Gm22411-201ENSMUST00000175462 126 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Gm22002-201ENSMUST00000175622 125 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Gm29736-201ENSMUST00000198189 385 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Gm42663-201ENSMUST00000199883 351 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms