Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Hoxa9P09631 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxa9P09631 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Hoxa9P09631 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm11908-201ENSMUST00000117755 347 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Mir7687-201ENSMUST00000184722 59 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm44582-201ENSMUST00000209125 445 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm45525-201ENSMUST00000210800 389 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm45777-201ENSMUST00000213009 301 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.83□□□□□ -1.48
Hoxa9P09631 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm43724-201ENSMUST00000197516 226 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm8039-201ENSMUST00000204758 712 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Mir337-201ENSMUST00000083592 97 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm25682-201ENSMUST00000083942 164 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.82□□□□□ -1.48
Hoxa9P09631 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hoxa9P09631 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Hoxa9P09631 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hoxa9P09631 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hoxa9P09631 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hoxa9P09631 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hoxa9P09631 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Hoxa9P09631 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.81□□□□□ -1.48
Hoxa9P09631 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hoxa9P09631 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms