Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a4A2AX52 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm7079-201ENSMUST00000119726 171 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm13740-201ENSMUST00000120590 310 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm22726-201ENSMUST00000158089 179 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm22132-201ENSMUST00000175316 100 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm8291-201ENSMUST00000209635 1261 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm18904-201ENSMUST00000218756 329 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm20768-201ENSMUST00000199527 2338 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm6427-201ENSMUST00000118721 979 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm11990-201ENSMUST00000121505 897 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Scarna13-201ENSMUST00000158164 275 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm7316-201ENSMUST00000165395 445 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm9006-201ENSMUST00000165520 841 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm3170-201ENSMUST00000168753 850 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm3348-201ENSMUST00000177813 850 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm27875-201ENSMUST00000184425 123 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm28683-201ENSMUST00000187134 615 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm28840-205ENSMUST00000189320 615 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm28835-203ENSMUST00000190062 615 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Mir5121-201ENSMUST00000198528 74 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 AC154738.7-201ENSMUST00000228606 579 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm10855-201ENSMUST00000100426 2541 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Fam26d-202ENSMUST00000218239 3075 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a4A2AX52 Gm43483-201ENSMUST00000196724 2860 ntBASIC4.74□□□□□ -1.65
Col6a4A2AX52 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm11908-201ENSMUST00000117755 347 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm18628-201ENSMUST00000220584 475 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 AC211878.1-201ENSMUST00000221668 474 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Snord15b-201ENSMUST00000083032 145 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Gm45548-201ENSMUST00000210076 3167 ntBASIC4.73□□□□□ -1.65
Col6a4A2AX52 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a4A2AX52 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms