Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm14539-201ENSMUST00000117527 174 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm22724-201ENSMUST00000158091 127 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm25246-201ENSMUST00000175476 69 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm37609-201ENSMUST00000191778 678 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm37581-201ENSMUST00000192371 988 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm6520-201ENSMUST00000200636 410 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.59□□□□□ -1.51
H2afb2S4R1M3 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
H2afb2S4R1M3 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm14772-201ENSMUST00000116562 514 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm11908-201ENSMUST00000117755 347 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm14732-201ENSMUST00000121372 545 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm24731-201ENSMUST00000158227 131 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm6872-201ENSMUST00000165001 700 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm22993-201ENSMUST00000175423 254 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm18537-201ENSMUST00000205709 989 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.58□□□□□ -1.52
H2afb2S4R1M3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.58□□□□□ -1.52
H2afb2S4R1M3 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms