Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm9088-201ENSMUST00000220237 508 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm11879-201ENSMUST00000121885 702 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm15237-201ENSMUST00000122104 469 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm9671-201ENSMUST00000171502 547 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Mir6992-201ENSMUST00000183342 109 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm29663-201ENSMUST00000186962 853 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm29592-201ENSMUST00000189434 370 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm37189-201ENSMUST00000192131 298 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm18427-201ENSMUST00000195422 515 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm44463-201ENSMUST00000198895 137 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm44219-201ENSMUST00000203005 273 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 AL645546.2-201ENSMUST00000224526 265 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm6104-201ENSMUST00000078030 603 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm22351-201ENSMUST00000083925 107 ntBASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cstf3Q99LI7 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.65□□□□□ -1.51
Cstf3Q99LI7 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.64□□□□□ -1.51
Cstf3Q99LI7 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Cstf3Q99LI7 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms