Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Scarna10-201ENSMUST00000158992 325 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm7152-201ENSMUST00000163570 605 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm6223-201ENSMUST00000178436 871 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm6055-201ENSMUST00000180532 378 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm26970-201ENSMUST00000182990 964 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm18537-201ENSMUST00000205709 989 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Rfx6Q8C7R7 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm24272-201ENSMUST00000102329 98 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm15332-201ENSMUST00000118386 357 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm14938-201ENSMUST00000119482 943 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm13489-201ENSMUST00000121234 971 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm11879-201ENSMUST00000121885 702 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm12293-201ENSMUST00000121898 590 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm24741-201ENSMUST00000158857 106 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm25065-201ENSMUST00000177914 132 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm25891-201ENSMUST00000180050 132 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm3650-201ENSMUST00000180600 747 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Mir7008-201ENSMUST00000184398 63 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm5694-201ENSMUST00000195648 641 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm29755-201ENSMUST00000196976 948 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm43148-201ENSMUST00000198237 520 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm43233-201ENSMUST00000200491 616 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm5990-201ENSMUST00000203126 746 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm45071-201ENSMUST00000205353 571 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm44538-201ENSMUST00000205615 348 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rfx6Q8C7R7 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Rfx6Q8C7R7 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Rfx6Q8C7R7 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx6Q8C7R7 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Rfx6Q8C7R7 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms