Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm26376-201ENSMUST00000104784 110 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm45215-201ENSMUST00000206407 395 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Mir678-201ENSMUST00000102114 84 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm26310-201ENSMUST00000157766 117 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm15500-201ENSMUST00000071523 894 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm22807-201ENSMUST00000082737 129 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 AC135669.2-201ENSMUST00000215636 4958 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm42837-201ENSMUST00000197071 2829 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm11245-201ENSMUST00000119419 1037 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm5353-201ENSMUST00000139800 793 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm22277-201ENSMUST00000157204 277 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28604-201ENSMUST00000186629 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28566-201ENSMUST00000186714 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28194-201ENSMUST00000187412 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28886-202ENSMUST00000187889 484 ntBASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a6Q8C6K9 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms