Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm37569-201ENSMUST00000192111 1722 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm25344-201ENSMUST00000104503 132 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm14865-201ENSMUST00000117523 494 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm13156-201ENSMUST00000118348 321 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm25989-201ENSMUST00000158761 133 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm9167-201ENSMUST00000182469 962 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm9357-201ENSMUST00000207138 805 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm46364-201ENSMUST00000218548 319 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 AC117237.1-201ENSMUST00000224035 395 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 AC140209.1-204ENSMUST00000226736 739 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm9985-201ENSMUST00000044101 510 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim47Q8C0E3 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Grik1-210ENSMUST00000228034 2708 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm45819-201ENSMUST00000210940 1751 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm13087-201ENSMUST00000118298 256 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm14620-201ENSMUST00000120656 383 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm11848-201ENSMUST00000121207 973 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm12358-201ENSMUST00000121842 520 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm26255-201ENSMUST00000122492 103 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm24682-201ENSMUST00000158764 137 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm8338-201ENSMUST00000163928 363 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm2619-202ENSMUST00000166777 651 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Mir1264-201ENSMUST00000175381 86 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Mir496b-201ENSMUST00000184935 113 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm28615-201ENSMUST00000187527 482 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm37620-201ENSMUST00000192910 501 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm43897-201ENSMUST00000204019 309 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm45316-201ENSMUST00000210128 162 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 AC151843.1-201ENSMUST00000215960 691 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 AC166263.1-201ENSMUST00000218586 238 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 AC113031.5-201ENSMUST00000227116 606 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 AC151907.1-201ENSMUST00000228812 412 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim47Q8C0E3 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.74□□□□□ -1.17
Trim47Q8C0E3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms