Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm14472-201ENSMUST00000119815 282 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm23662-201ENSMUST00000158046 111 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm29474-201ENSMUST00000187688 379 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm37235-201ENSMUST00000195171 59 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm18702-201ENSMUST00000196923 588 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm6520-201ENSMUST00000200636 410 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm44134-202ENSMUST00000204777 545 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trub1Q8C0D0 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm25459-201ENSMUST00000157953 114 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm3170-201ENSMUST00000168753 850 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm3348-201ENSMUST00000177813 850 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm8419-201ENSMUST00000189886 412 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm37719-201ENSMUST00000194615 292 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm7733-201ENSMUST00000199038 919 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm4874-201ENSMUST00000203589 691 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm5087-204ENSMUST00000225820 645 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trub1Q8C0D0 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm4989-201ENSMUST00000118711 749 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm23883-201ENSMUST00000122686 290 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Gm23774-201ENSMUST00000158990 131 ntBASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trub1Q8C0D0 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms