Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Aldh1a1-201ENSMUST00000087638 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Tcaf1-203ENSMUST00000121083 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gngt2-203ENSMUST00000107708 629 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gngt2-204ENSMUST00000107709 587 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm11951-201ENSMUST00000116005 431 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm15162-201ENSMUST00000119325 283 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm5760-201ENSMUST00000119692 1002 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm15465-201ENSMUST00000120368 358 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm14768-201ENSMUST00000122126 678 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm18728-201ENSMUST00000186155 753 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 AC136146.1-201ENSMUST00000196180 91 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm42628-201ENSMUST00000198498 764 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm42526-201ENSMUST00000198956 393 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm44977-201ENSMUST00000205283 420 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm44928-201ENSMUST00000208098 128 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm17737-201ENSMUST00000210183 1147 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm45704-201ENSMUST00000212582 403 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Elof1-205ENSMUST00000216837 864 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.73□□□□□ -1.01
Trim35Q8C006 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Olfr15-201ENSMUST00000080917 939 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm25518-201ENSMUST00000083864 107 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Snora2b-201ENSMUST00000084005 137 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm8074-201ENSMUST00000095071 252 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trim35Q8C006 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Havcr1-203ENSMUST00000109223 1982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm43292-201ENSMUST00000199580 2449 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Gm26890-201ENSMUST00000180681 3221 ntTSL 2 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Il12b-201ENSMUST00000102796 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Trim35Q8C006 CT009510.2-203ENSMUST00000226704 2136 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Rap1gds1-209ENSMUST00000200396 2622 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm10797-201ENSMUST00000099661 2222 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm25092-201ENSMUST00000103996 129 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm14799-201ENSMUST00000117502 429 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm8087-201ENSMUST00000119091 567 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm9516-201ENSMUST00000119684 424 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Trim35Q8C006 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm23465-201ENSMUST00000157134 262 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm22145-201ENSMUST00000157396 148 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Guk1-205ENSMUST00000170895 743 ntTSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm22461-201ENSMUST00000175272 70 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm4904-201ENSMUST00000178243 1195 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm21960-201ENSMUST00000181924 452 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm19193-201ENSMUST00000190263 590 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm37511-201ENSMUST00000192901 294 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm38060-201ENSMUST00000194822 464 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm43310-201ENSMUST00000198975 820 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm23786-202ENSMUST00000200181 119 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm7786-201ENSMUST00000210494 436 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm18488-201ENSMUST00000215082 364 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 AC158641.1-201ENSMUST00000218933 229 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 1700001L19Rik-202ENSMUST00000222604 780 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 AC098718.2-201ENSMUST00000226822 285 ntBASIC8.72□□□□□ -1.01
Trim35Q8C006 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Trim35Q8C006 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Trim35Q8C006 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms