Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm20786-201ENSMUST00000212649 436 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC167202.1-201ENSMUST00000219027 331 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC156952.1-201ENSMUST00000220361 793 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm7042-201ENSMUST00000223027 384 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC122858.1-201ENSMUST00000226212 433 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC122858.3-201ENSMUST00000226341 740 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC122858.1-202ENSMUST00000228290 986 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm15715-201ENSMUST00000118032 283 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm3943-201ENSMUST00000118606 718 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm15044-201ENSMUST00000120703 598 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm12936-201ENSMUST00000121439 301 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm25906-201ENSMUST00000158489 126 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm3008-201ENSMUST00000160566 571 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm37054-201ENSMUST00000193481 543 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm37308-201ENSMUST00000194684 100 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm17937-201ENSMUST00000197908 742 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 AC154417.1-201ENSMUST00000223876 476 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm26203-201ENSMUST00000082911 114 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp40Q8BWR4 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm5381-201ENSMUST00000117975 1250 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm14368-201ENSMUST00000145305 415 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm27855-201ENSMUST00000184122 128 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm45249-201ENSMUST00000211021 348 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm18618-201ENSMUST00000222211 473 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm5087-204ENSMUST00000225820 645 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm44843-201ENSMUST00000208320 1396 ntBASIC8.1□□□□□ -1.11
Usp40Q8BWR4 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 AC122024.1-201ENSMUST00000219276 4850 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm7700-201ENSMUST00000120273 970 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm22106-201ENSMUST00000122544 127 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm23250-201ENSMUST00000157444 267 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm21756-201ENSMUST00000178380 930 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm21405-201ENSMUST00000179024 930 ntBASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp40Q8BWR4 Gm27817-201ENSMUST00000184302 233 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 330.4 ms