Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm18007-201ENSMUST00000205019 844 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm14769-201ENSMUST00000118590 432 ntBASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm43408-201ENSMUST00000198263 440 ntBASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.56□□□□□ -1.36
Nup98Q6PFD9 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nup98Q6PFD9 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm13007-201ENSMUST00000121866 365 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm13363-201ENSMUST00000122008 522 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm22529-201ENSMUST00000158817 123 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm23799-201ENSMUST00000175559 120 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm29072-201ENSMUST00000191149 678 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm45215-201ENSMUST00000206407 395 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm5418-201ENSMUST00000206932 528 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm18205-201ENSMUST00000209215 841 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm23514-201ENSMUST00000082827 130 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm16179-201ENSMUST00000120685 373 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm12422-201ENSMUST00000121431 302 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm25389-201ENSMUST00000157340 286 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm45422-201ENSMUST00000211476 246 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Gm18924-201ENSMUST00000211929 316 ntBASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Nup98Q6PFD9 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Nup98Q6PFD9 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms