Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.72□□□□□ -1.49
Six1Q62231 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Gm16139-201ENSMUST00000160015 420 ntBASIC5.72□□□□□ -1.49
Six1Q62231 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.72□□□□□ -1.49
Six1Q62231 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Six1Q62231 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.72□□□□□ -1.49
Six1Q62231 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.72□□□□□ -1.49
Six1Q62231 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Six1Q62231 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.72□□□□□ -1.49
Six1Q62231 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Six1Q62231 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.72□□□□□ -1.49
Six1Q62231 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.72□□□□□ -1.49
Six1Q62231 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Six1Q62231 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Six1Q62231 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Six1Q62231 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Six1Q62231 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Six1Q62231 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Six1Q62231 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Six1Q62231 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Six1Q62231 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Six1Q62231 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Six1Q62231 Gm25917-201ENSMUST00000104267 130 ntBASIC5.71□□□□□ -1.5
Six1Q62231 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Gm15754-201ENSMUST00000119191 478 ntBASIC5.71□□□□□ -1.5
Six1Q62231 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.71□□□□□ -1.5
Six1Q62231 Gm22599-201ENSMUST00000157597 132 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm10087-201ENSMUST00000167650 330 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm22932-201ENSMUST00000175510 72 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Gm29509-201ENSMUST00000185716 321 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm18799-201ENSMUST00000189104 913 ntBASIC5.71□□□□□ -1.5
Six1Q62231 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm19921-201ENSMUST00000210505 703 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm38574-201ENSMUST00000211855 640 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.71□□□□□ -1.5
Six1Q62231 Gm6362-201ENSMUST00000217686 836 ntBASIC5.71□□□□□ -1.5
Six1Q62231 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.71□□□□□ -1.5
Six1Q62231 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Six1Q62231 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Six1Q62231 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.71□□□□□ -1.5
Six1Q62231 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.71□□□□□ -1.5
Six1Q62231 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Six1Q62231 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Six1Q62231 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Six1Q62231 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Six1Q62231 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Six1Q62231 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Six1Q62231 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Six1Q62231 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Six1Q62231 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Six1Q62231 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Six1Q62231 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.7□□□□□ -1.5
Six1Q62231 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Six1Q62231 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Gm6175-201ENSMUST00000121351 400 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Gm15335-201ENSMUST00000122442 411 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Gm24383-201ENSMUST00000122691 333 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Gm8993-201ENSMUST00000182182 983 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.7□□□□□ -1.5
Six1Q62231 Gm28996-201ENSMUST00000190316 721 ntBASIC5.7□□□□□ -1.5
Six1Q62231 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.7□□□□□ -1.5
Six1Q62231 Gm38360-201ENSMUST00000195130 454 ntBASIC5.7□□□□□ -1.5
Six1Q62231 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.7□□□□□ -1.5
Six1Q62231 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Six1Q62231 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
Six1Q62231 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms