Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm46193-201ENSMUST00000219399 364 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm18405-201ENSMUST00000220743 511 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm35619-201ENSMUST00000222548 600 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm43681-201ENSMUST00000201581 1903 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm26996-201ENSMUST00000204418 1359 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 AC124516.2-201ENSMUST00000221455 1829 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm15181-201ENSMUST00000120142 177 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm15142-201ENSMUST00000121013 856 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm12101-201ENSMUST00000121590 390 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm23250-201ENSMUST00000157444 267 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm25434-201ENSMUST00000158278 167 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm3111-201ENSMUST00000167426 490 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm18560-201ENSMUST00000173463 1123 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm42924-201ENSMUST00000197261 185 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 AC153840.1-201ENSMUST00000219685 313 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 CT009742.1-201ENSMUST00000222507 702 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Mir425-201ENSMUST00000083645 85 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm6866-201ENSMUST00000188559 2549 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Gm37321-201ENSMUST00000195742 1872 ntBASIC12.19□□□□□ -0.46
Trim41Q5NCC3 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm13650-201ENSMUST00000117729 433 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm11911-201ENSMUST00000117938 1023 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm11501-201ENSMUST00000118039 581 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm15988-201ENSMUST00000118677 367 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm22277-201ENSMUST00000157204 277 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm5711-201ENSMUST00000197896 421 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Igkv12-66-201ENSMUST00000199305 348 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm35558-202ENSMUST00000221819 499 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 AC113125.2-201ENSMUST00000226837 362 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm24921-201ENSMUST00000083024 107 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm22126-201ENSMUST00000083244 142 ntBASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim41Q5NCC3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 AC122828.2-201ENSMUST00000222511 2880 ntBASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim41Q5NCC3 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms