Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm16335-201ENSMUST00000077495 309 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm17165-201ENSMUST00000096155 493 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
Upf3bQ3ULL6 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm11561-201ENSMUST00000117429 417 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm11270-201ENSMUST00000117685 471 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm15741-201ENSMUST00000119401 754 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm7079-201ENSMUST00000119726 171 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm26372-201ENSMUST00000157831 236 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm23224-201ENSMUST00000158122 271 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm22993-201ENSMUST00000175423 254 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm27024-201ENSMUST00000182561 755 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Upf3bQ3ULL6 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm4989-201ENSMUST00000118711 749 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm6055-201ENSMUST00000180532 378 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm4322-201ENSMUST00000191094 336 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm2429-201ENSMUST00000194635 586 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm7733-201ENSMUST00000199038 919 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm4874-201ENSMUST00000203589 691 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm45750-201ENSMUST00000211966 354 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm18996-201ENSMUST00000214851 755 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Gm18329-201ENSMUST00000215832 589 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upf3bQ3ULL6 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms