Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm26078-201ENSMUST00000104067 128 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm4989-201ENSMUST00000118711 749 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm11737-201ENSMUST00000118713 468 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm15959-201ENSMUST00000121724 368 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm4660-201ENSMUST00000131499 403 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm26372-201ENSMUST00000157831 236 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm1972-201ENSMUST00000181606 964 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm38122-201ENSMUST00000192679 885 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm3257-201ENSMUST00000207217 675 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Mir298-201ENSMUST00000083476 82 ntBASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ctdnep1Q3TP92 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm27030-201ENSMUST00000182551 464 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm37203-201ENSMUST00000191618 385 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm8920-201ENSMUST00000196153 924 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Mir219c-201ENSMUST00000199860 60 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm45722-201ENSMUST00000213075 466 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm18247-201ENSMUST00000222937 601 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ctdnep1Q3TP92 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ctdnep1Q3TP92 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms