Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm23692-201ENSMUST00000101881 160 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm6584-201ENSMUST00000119671 447 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm14845-201ENSMUST00000121259 306 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm23534-201ENSMUST00000157539 97 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm26085-201ENSMUST00000157900 116 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm16114-201ENSMUST00000161930 300 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm28685-201ENSMUST00000187545 1101 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm8861-201ENSMUST00000196346 832 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm8891-201ENSMUST00000198546 832 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 CT030238.1-201ENSMUST00000228393 442 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm24029-201ENSMUST00000083928 143 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col17a1Q07563 AC121942.1-201ENSMUST00000224459 2891 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col17a1Q07563 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.91□□□□□ -0.98
Col17a1Q07563 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm11912-201ENSMUST00000117235 264 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm12040-201ENSMUST00000118357 537 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm4732-201ENSMUST00000118778 473 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm11484-201ENSMUST00000119808 338 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm13059-201ENSMUST00000119881 398 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Mup-ps18-201ENSMUST00000120145 531 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm26034-201ENSMUST00000158154 116 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm42461-201ENSMUST00000198627 1150 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm6366-201ENSMUST00000198766 826 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm18660-201ENSMUST00000199542 629 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm7688-201ENSMUST00000212857 337 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm7045-201ENSMUST00000221466 605 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm42876-201ENSMUST00000196989 3215 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Col17a1Q07563 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Col17a1Q07563 AC130217.2-201ENSMUST00000224009 2990 ntBASIC8.9□□□□□ -0.98
Col17a1Q07563 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Col17a1Q07563 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Col17a1Q07563 Gm7269-201ENSMUST00000210819 1373 ntBASIC8.9□□□□□ -0.99
Col17a1Q07563 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Col17a1Q07563 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC8.9□□□□□ -0.99
Col17a1Q07563 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Col17a1Q07563 Gm44144-201ENSMUST00000203683 1960 ntBASIC8.9□□□□□ -0.99
Col17a1Q07563 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC8.9□□□□□ -0.99
Col17a1Q07563 Gm14304-201ENSMUST00000117272 446 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm14158-201ENSMUST00000118409 308 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm7657-201ENSMUST00000118851 666 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm26153-201ENSMUST00000157433 127 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm23925-202ENSMUST00000188429 132 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm37341-201ENSMUST00000194680 371 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Trav3-2-201ENSMUST00000198999 305 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm45910-201ENSMUST00000212493 1003 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 AC153529.1-201ENSMUST00000217818 370 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 LOC102637012-201ENSMUST00000217248 2562 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms